CDS

Accession Number TCMCG077C24380
gbkey CDS
Protein Id KAF5749636.1
Location complement(join(15847550..15847633,15848432..15848561,15848809..15848928,15850180..15850280,15850399..15850536,15850615..15850710,15850822..15850944,15851738..15851881,15852279..15852416,15852495..15852659,15853360..15853524,15853971..15854048,15854140..15854266,15854351..15854541,15854638..15854710,15854807..15854862,15855117..15855287,15855392..15855505,15855579..15855671,15856365..15856568,15857165..15857242,15857392..15857478,15857625..15857706,15857790..15857902,15857987..15858137,15858462..15858580,15859609..15859806,15860492..15860615,15860991..15861110,15861199..15861329,15863244..15863375,15863517..15863618,15864608..15864814,15864911..15865027,15865460..15865621,15866214..15866303,15867004..15867216,15867312..15867434,15867634..15867719,15868885..15869044,15870333..15870443,15870549..15870653,15870747..15870821,15871298..15871393,15871744..15871884))
Organism Tripterygium wilfordii
locus_tag HS088_TW04G01607

Protein

Length 1877aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000004.1
Definition hypothetical protein HS088_TW04G01607 [Tripterygium wilfordii]
Locus_tag HS088_TW04G01607

EGGNOG-MAPPER Annotation

COG_category S
Description Nuclear pore complex protein
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14310        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044611        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTCCCCAAGGAAACTCCTATCAACGATCGAATCCACTCTCCTTGGCCCGTCGCCTCCCTCACCGGCGCAGAAGGTCGATCTTATGCACGCACTTCGAAGCTCCTACTCCTCCCTCCAGTCCCTTCTCTCCTACCCGCCTCCGAAGCCCTCAGACCGTTCGCAAGTGCAATCAGGAGAGGTTAGGCTGCCGGATTCGCCACCGATATCACTTGACGATCAGGATATACAGATTGCCCTGAAATTGAGTGATGATCTGCATCTCAATGAAATTGATTGTGTTCGTTTGCTTGTTTCTGCCAACCAAGAGTGGGGTTTAATGGGAAGAGAACCGTTGGACATTTTACGCCTAGCAGCTGGGCTCTGGTATATGGAGAGGCGCGATTTAATAACAGCCTTGTATACGTTATTAAGAGCTGCTGTGCTTGATCCAGGGCAAGAACCTGATCTTATGGCTGACATCCAGAATCTTCTGGAGAATCTTATCAATTCTGGGCTTAGACAGCAATTGATGTCTCTGATAAAGGCACTCAATCGGGACGAACCAGCTGGCTTAGGCGGGCCCCTTTGTGAGAATTATGTCCTTGATGCTCGAGGTGCTCTTGTTGCGCGGCGAGCTGTGGTCAGTAGGGAAAGACTGATACTTGGACATTGCCTTGTCCTCTCTGTTCTGGTTGTGCGGACAAGTCCAAAAGATGTAAAGGATGCCTTTTCTGCTTTGAAAGATAGTGCTGCTGAACTTAGTGAGAGCAATGACATTATAAAGCGTCAGATCACATTTAGTCTCCTTTTTTCTCTTGTCATTGATTTTATATCAGACGCTCTGAGTGCGGCACCTGATAAATTATCCGTTTTATCTCAAGACGCTTCATTTAGGAAAGAATTCCATGAAATTGTGATGGCTTCTGGAAGTGATCCAATTGAGGAGGGTTTCATTGGTTGTGTAAGGCTTGCTTGGGCGGTTCATTTGATACTAATACATGATGGGACGGCTGCTAGCACAACGTCAAATGATTTAGGTTACATATATTCGTGCCTGGATATGATTTTCTCGAACAATGTCTTTCAGTTTTTAATGGATAAAGTTCTTTGTACCTCAGCCTACCAGAATGACGATGAGGATATGATCCACATGTATAATGCTTATCTGCACAAACTGATCACTTGCTTCCTGTCACACCCTCTTGCTAGGGACAAGGTTAGAGAATCAAAGGAGAAGGCTATGAGCTTGCTTAATTCATATCGTATGGCTGGCGCACATGATATCATGCATGATGCGAGCTTGCAATCTGAAACGGCTGTTGAAAGTGGACCATTACCGTTTGTCTCTCTGCTGAAGTTTGTGAGTGAGGTTTATCAGAAGGAACCAGATCTGTTGTCTGGGAATGATGACTTGTGGACATTCGTGAATTTTGCTGGAGAGGATCATACTAATTTTCAAACACTAGTGGCTTTCTTGGAAATGCTAAGTACCTTGGCATCCAATCAAGAAGGTGCTTCTAAGGTTTATGAGTTACTTCAGGGTAAAGCTTTCCGCTCTGTTGGGTGGGGTACTTTATTTGATTGCTTATCAATTTATGACGAGAAGTTCAAACAATCCCTTCAAACTGCTGGGGCCATGTTACCAGAGTTTCAAGAGGGGGATGCAAAAGCACTTGTTGCTTACTTGAATGTTCTACAAAAGGTTATGGAAAATGGCGATCCCAATGAAAAAAAGAACTGGTTTGATGATATTGAACCATTATTCAAGCTTCTAAGTTATGAAAATGTGCCTCCTTATCTAAAGGGTGCATTGCGGAATGCAATAGCTACATTCGTTACTGTCTCTCCTGTCCTAAAAGATACTATATGGAGATTTCTTGAGCAGTATGATCTGGCTGTAGTTGTTGGAAACAGTTCACAGCCGATCTCAGGACAGGTTTATGATATGCAGTTTGAGTTGAATGAAATAGAATCAAGGCGGGAACAGTATCCCTCAACGATTTCTTATCTTAATCTGTTAAATGCTCTTACTGCTGAGGAAAAAGATGTAAGCGATAGAGGACGTAGATTCATTGGCATCTTTAGATTCATTTGTGATCATGTGTTCGGGCCATTTCCTCAAAGAGCATATGCAGATCCTTGCGAGAAATGGAAGCTGGTTGTTGCTTGTCTGAAGCATTTTCATATGGTATTGAACATGTATGACATTCAAGATGAGGACATAGACAGCGCTGTCGACCAATCACAGGTTTCTGCCGTGGCATACCAAACTCCGTTACAGATGCAGCTCCCTGTCTTGGAGTTGCTGAAGGATTTCATGAGTGGCAAAACTATTTTTAGGAATATCATGGGTATTCTTACACAAGGCGTTGATGCAATTATTGGTGAACGAACTAGTCAAACATATGGGCAATTTCTAGAGAAGGCTGTGCAGCTTTCCTTGGAAATTATCATCCTTATCATGGAGAAGGACTTACTACTTTCTGATTACTGGCGTCCTTTATACCAGCCTTTGGATGTTGTTCTGTCTCAGGATCATAACCAAATTGTTTCTCTGTTAGAGTATGTCCGATATGATTTCCTGCCTCAAATTCAGCAATGCTCAATCAAAATCATGAGCATCTTAAGTTCTCGCATAGTTGGGCTTGTACAGTTGCTTCTAAAATCCAATGCTGCAACCAGTTTGGTTGAGGACTATGCAGCATGCCTTGAGTTACGTACAGAAGAGTGTCAGATTATAGAGAACAACAATGATGATCCTGGTGTCCTGATTATGCAGCTTCTAATAAATAACATTAGTCGGCCAGCACCAAATATCACACATCTACTGCTTAAGTTTGATCTTGATACCCCAGTTGAGAGAACAGTTTTACAGCCAAAGTTCCATTACAGTTGCTTGAAGGTCATTCTTGAAATCCTGGATAAGCTTTCAAAGCCAGAAGTTAATGCACTTCTTCATGAGTTTGGTTTTCAGCTGATTTATGAGTTGTGCTTGGATCCACTAACAAGTGGTCCCACCATGGATCTGTTGAGCAATCAAAAATATGTTTTCTTTGTGAAGCACCTTGGCACAATTGGTGTGGCTCCTCTTCCTAAGCGAAATAGCAACCAGGCACTTCGCATCAGTTCTCTGCATCAGAGAGCGTGGTTGTTGAAGCTTTTAGCTATTGAATTGCATGCTGGTCATGCAAGTAGCTCAGCTCACCGGGAAGCATGCCAGAGTATATTCACGCATCTTTTTGGACATGGACTTGAAATTGGAACTGGTCACTTCGCATCTGATTCCATGATTCCTCAAAATGGTGTGAATCAGGCTGGAGCCAGAGCGGTCATTAAGAGTAAGGTGTTAGAATTGCTAGAGATTCTTCAGTTCAGAACACCAGACGCCACTACGAAGCTTTCTCAGTTTGTTTCTAATACGAAATATAGCTCACTGGCAGAAGAAATACTCAGGGATCCAATTTCTTCCGGAAAGGGTGGTATTTATTGTTATTCAGAACGTGGTGATCGCCTAATTGACCTTCCGTGCTTCCGTGACACACTCTGGCAGAAATTCAATTCTGTTTATCCTCTGCTAAGCAACGTTGGCAGTGAGGCTGAATTGAATGACGTGAGGGAGACGATTCAACAGTTGTTGAGATGGGGTTGGAGATACAATAGGAACCTTGAGGAACATGCGGCCCAACTTCATATGTTAACTGGATGGTCACAGATTGTTGAGGTTTCTGTATCTAGAAGAATATCGACACTCGAGAATCGATCTGAGATTTTATATCAAATTCTTGACGTCTCTCTTAGCTCCTCTGCTTCTCCAGATTGTTCTTTGAGGATGGCATTTGTATTGACTCAGGTTGCACTTACTTGCATGGCAAAACTACGCGATGAAAGATTCTTATGCCCGGGTGGTTTAAACTCTGACAGTGTCACATGTCTTGATATTATCCTGGTGAAGCAATTGTCAAATGGCGCATGCCACTCCATACTGTTTAAGCTCATTATGGCAATACTTAGACATGAATCGTCTGAAGCATTAAGGAGACGCCAATACGCATTGCTGCTTAGCTATTTTCAGTATTGTCAGCATACGCTTGATCCAGATGTCCCAACAACAGTTCTGCAGTTCTTGTTGCTTGATGAACAAGATGGTGGAGATCTAGATCTTCAGAAGATTGACAGAGAACAGGCAGAGCTGGCTCGTGCCAATTTTTCCATATTAAGAAAAGAGGCTCAAGCAATCTTGGATTTGGTGATAAAGGATGCAAATCAAGGCAGTGAACCAGGGAAAACAATATCTCTCTATGTTCTGGATGCAATAATTTGTATTGATCAAGAGAGATATTTCTTAAGCCAGCTTCAAGCTAGGGGATTTTTGCGGTCTTGCCTTACAAACATCAGTAACATTTCCCTTCAGGATGGTGGGCATACACTGGAGTCGTTGCAGCAAGCATGTACTCTTGAGGCCGAACTTGCTCTACTATTGAGGATTAGCCACAAGTATGGCAAATCTGGGGCCCAGATTTTGTTTTCGATGGGTGCACTGGAGCATGTTACTTCGTGCAAGGCAGTCAATTGGCAGGGAAGTTTGAGGCGATTTGATTCGAAATTTAGAAGAGATATTGCTATGGAGGTTGAGAGACAGCGGATGATTGTAACCCTTATATTTAGATTGGTGTTTTCCTTGACTTCATTGGTTGATACTTCTGATATTTTTGAGGTGAAGAATAAAATAGTTCGTGAAGTCATAGATTTTGTCAAAGGACATCAATTGCTCTTTGATCAAATTCTTCGCCAAGACATTTCTGAAGCTGATGAATTGACGATGGAGCAGGTTAATCTCTCTGTTGGTGTACTTAGCAAGGTTTGGGCATATGAAGAGAATGATGAATTTGGCTTTGTTCAAGGGCTTTTCGCAATGATGCTTTCTCTCTTCCCTAATGATCTAGAGGCTCCTGCTTTTTCCCCGCGTCGACAAACTCTTGAGAATCAGAGGAAGTCAGAACTGGATTCCTTTCGGTTATGCTTCAGCCTAAGCTCTTACCTATATTTTCTGGTCACAAAGAAATCTCTCAGGCTACAGGTCTCAGGCAGCCCTGTTGATTACCATGCTCCTGCCAGACTTCCACAACCTACATTGACGTCACTTGTTTCTCTTCTTAGTTCCGTCACATCTGCGCTTGAAAGAGCAGCTGAGGAGAAATTCTTATTACTGAATAAGATCCGAGACATAAATGAACTCTCAAGACAGGAGGTTGATGAGATCATCCGTATGTGTGCTCGACAAGATTATGGCTCTGCATCTGATGATATACAGAAAAGGAGGTATATTGCAATGGTTGAAATGTGCCAAGTGGCTGGCAATCGAGATCAATTAATTACCTTATTACTTCCACTAGCAGAATTTCTGCTAAATATCATCATCATACATTTTAAAGATAGATCTATATCAAGTCCTGGTGGAAATATGAAATCACTCACAAATACCTCCAGGTTGGAATCAGAACAGGACATTTCTGTGTTATGTGGGATGTTGCTTCCAGCCTTAGAACAACTTGAGTTATTAAGCGAGGATAAAGCATGCCACAATCTGAAGGTGTTCAAGAGACTTGTAACTTCACTCAAAGAAACGACAATACTAAAGCTGGCTGTTTGA
Protein:  
MVSPRKLLSTIESTLLGPSPPSPAQKVDLMHALRSSYSSLQSLLSYPPPKPSDRSQVQSGEVRLPDSPPISLDDQDIQIALKLSDDLHLNEIDCVRLLVSANQEWGLMGREPLDILRLAAGLWYMERRDLITALYTLLRAAVLDPGQEPDLMADIQNLLENLINSGLRQQLMSLIKALNRDEPAGLGGPLCENYVLDARGALVARRAVVSRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSESNDIIKRQITFSLLFSLVIDFISDALSAAPDKLSVLSQDASFRKEFHEIVMASGSDPIEEGFIGCVRLAWAVHLILIHDGTAASTTSNDLGYIYSCLDMIFSNNVFQFLMDKVLCTSAYQNDDEDMIHMYNAYLHKLITCFLSHPLARDKVRESKEKAMSLLNSYRMAGAHDIMHDASLQSETAVESGPLPFVSLLKFVSEVYQKEPDLLSGNDDLWTFVNFAGEDHTNFQTLVAFLEMLSTLASNQEGASKVYELLQGKAFRSVGWGTLFDCLSIYDEKFKQSLQTAGAMLPEFQEGDAKALVAYLNVLQKVMENGDPNEKKNWFDDIEPLFKLLSYENVPPYLKGALRNAIATFVTVSPVLKDTIWRFLEQYDLAVVVGNSSQPISGQVYDMQFELNEIESRREQYPSTISYLNLLNALTAEEKDVSDRGRRFIGIFRFICDHVFGPFPQRAYADPCEKWKLVVACLKHFHMVLNMYDIQDEDIDSAVDQSQVSAVAYQTPLQMQLPVLELLKDFMSGKTIFRNIMGILTQGVDAIIGERTSQTYGQFLEKAVQLSLEIIILIMEKDLLLSDYWRPLYQPLDVVLSQDHNQIVSLLEYVRYDFLPQIQQCSIKIMSILSSRIVGLVQLLLKSNAATSLVEDYAACLELRTEECQIIENNNDDPGVLIMQLLINNISRPAPNITHLLLKFDLDTPVERTVLQPKFHYSCLKVILEILDKLSKPEVNALLHEFGFQLIYELCLDPLTSGPTMDLLSNQKYVFFVKHLGTIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGHASSSAHREACQSIFTHLFGHGLEIGTGHFASDSMIPQNGVNQAGARAVIKSKVLELLEILQFRTPDATTKLSQFVSNTKYSSLAEEILRDPISSGKGGIYCYSERGDRLIDLPCFRDTLWQKFNSVYPLLSNVGSEAELNDVRETIQQLLRWGWRYNRNLEEHAAQLHMLTGWSQIVEVSVSRRISTLENRSEILYQILDVSLSSSASPDCSLRMAFVLTQVALTCMAKLRDERFLCPGGLNSDSVTCLDIILVKQLSNGACHSILFKLIMAILRHESSEALRRRQYALLLSYFQYCQHTLDPDVPTTVLQFLLLDEQDGGDLDLQKIDREQAELARANFSILRKEAQAILDLVIKDANQGSEPGKTISLYVLDAIICIDQERYFLSQLQARGFLRSCLTNISNISLQDGGHTLESLQQACTLEAELALLLRISHKYGKSGAQILFSMGALEHVTSCKAVNWQGSLRRFDSKFRRDIAMEVERQRMIVTLIFRLVFSLTSLVDTSDIFEVKNKIVREVIDFVKGHQLLFDQILRQDISEADELTMEQVNLSVGVLSKVWAYEENDEFGFVQGLFAMMLSLFPNDLEAPAFSPRRQTLENQRKSELDSFRLCFSLSSYLYFLVTKKSLRLQVSGSPVDYHAPARLPQPTLTSLVSLLSSVTSALERAAEEKFLLLNKIRDINELSRQEVDEIIRMCARQDYGSASDDIQKRRYIAMVEMCQVAGNRDQLITLLLPLAEFLLNIIIIHFKDRSISSPGGNMKSLTNTSRLESEQDISVLCGMLLPALEQLELLSEDKACHNLKVFKRLVTSLKETTILKLAV